6MPW
De Novo Design of membrane protein--mini-eVgL membrane protein, C2221 form-1
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ALS BEAMLINE 8.3.1 |
Synchrotron site | ALS |
Beamline | 8.3.1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2018-08-18 |
Detector | DECTRIS PILATUS3 S 6M |
Wavelength(s) | 1.11583 |
Spacegroup name | C 2 2 21 |
Unit cell lengths | 55.580, 88.802, 48.207 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 47.113 - 2.500 |
R-factor | 0.213 |
Rwork | 0.212 |
R-free | 0.23240 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | one bundle of 6MCT |
RMSD bond length | 0.002 |
RMSD bond angle | 0.387 |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | PHASER |
Refinement software | PHENIX ((1.12_2829: ???)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 50.000 | 2.630 |
High resolution limit [Å] | 2.480 | 2.480 |
Rmerge | 0.067 | 0.580 |
Rmeas | 0.070 | 0.610 |
Number of reflections | 4438 | 672 |
<I/σ(I)> | 19.71 | 4.84 |
Completeness [%] | 99.0 | 94.1 |
Redundancy | 12.3 | 11.9 |
CC(1/2) | 0.999 | 0.986 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 6.7 | 298 | 0.05 M MgCl2, 0.1 %w/v NaN3, 0.1 M Na Cacodylate, pH 6.7, 6.6 %w/v PEG 3350 |