6MPA
Crystal structure of BlMan5B in complex with GlcNAc (soaking)
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | LNLS BEAMLINE W01B-MX2 |
Synchrotron site | LNLS |
Beamline | W01B-MX2 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2017-06-08 |
Detector | DECTRIS PILATUS 2M |
Wavelength(s) | 1.459 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 69.893, 101.378, 173.003 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 43.733 - 1.900 |
R-factor | 0.1789 |
Rwork | 0.178 |
R-free | 0.20210 |
Structure solution method | MOLECULAR REPLACEMENT |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | PHASER |
Refinement software | PHENIX (1.13_2998) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 43.733 | 43.733 | 2.010 |
High resolution limit [Å] | 1.900 | 5.670 | 1.900 |
Rmerge | 0.124 | 0.035 | 1.607 |
Rmeas | 0.135 | 0.038 | 1.757 |
Number of reflections | 97455 | 3936 | 15529 |
<I/σ(I)> | 11.13 | 43.92 | 1.08 |
Completeness [%] | 99.9 | 99.4 | 99.7 |
Redundancy | 6.394 | 6.482 | 6.132 |
CC(1/2) | 0.998 | 0.999 | 0.537 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 273.15 | 100 mM sodium citrate pH 4.5 and 12-16% PEG 3000 |