6MNN
6236 TCR bound to I-Ab Padi4
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | NSLS-II BEAMLINE 17-ID-2 |
Synchrotron site | NSLS-II |
Beamline | 17-ID-2 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2018-08-01 |
Detector | DECTRIS EIGER X 9M |
Wavelength(s) | 0.9793 |
Spacegroup name | C 1 2 1 |
Unit cell lengths | 250.412, 68.872, 64.466 |
Unit cell angles | 90.00, 91.97, 90.00 |
Refinement procedure
Resolution | 29.620 - 2.830 |
R-factor | 0.2219 |
Rwork | 0.219 |
R-free | 0.26240 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 6mkd |
Data reduction software | XDS |
Data scaling software | Aimless (0.5.21) |
Phasing software | PHASER |
Refinement software | PHENIX (1.13_2998) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 29.620 | 2.900 |
High resolution limit [Å] | 2.830 | 2.830 |
Rmerge | 0.124 | 0.877 |
Rmeas | 0.134 | 0.951 |
Rpim | 0.051 | 0.361 |
Number of reflections | 26309 | 1817 |
<I/σ(I)> | 11.9 | |
Completeness [%] | 99.4 | 93.8 |
Redundancy | 6.9 | 6.5 |
CC(1/2) | 0.997 | 0.791 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 5.8 | 298 | 14% PEG 4000, 100mM NaCacodylate, 100 mM NaCitrate |