6MNG
4738 TCR bound to IAb Padi4
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | NSLS-II BEAMLINE 17-ID-2 |
Synchrotron site | NSLS-II |
Beamline | 17-ID-2 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2018-08-01 |
Detector | DECTRIS EIGER X 9M |
Wavelength(s) | 0.9794 |
Spacegroup name | C 1 2 1 |
Unit cell lengths | 250.917, 69.163, 64.150 |
Unit cell angles | 90.00, 91.48, 90.00 |
Refinement procedure
Resolution | 29.660 - 2.662 |
R-factor | 0.2321 |
Rwork | 0.230 |
R-free | 0.26930 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 4p23 |
RMSD bond length | 0.004 |
RMSD bond angle | 0.708 |
Data reduction software | XDS |
Data scaling software | Aimless (0.5.21) |
Phasing software | PHASER |
Refinement software | PHENIX (1.10.1_2155) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 29.660 | 2.730 |
High resolution limit [Å] | 2.660 | 2.660 |
Rmerge | 0.109 | 0.761 |
Rmeas | 0.118 | 0.821 |
Rpim | 0.044 | 0.306 |
Total number of observations | 218095 | |
Number of reflections | 31505 | 2074 |
<I/σ(I)> | 11.6 | |
Completeness [%] | 99.1 | 90.7 |
Redundancy | 6.9 | 6.9 |
CC(1/2) | 0.997 | 0.878 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 5.8 | 298 | 12% PEG 4000, 100mM NaCacodylate, 100 mM NaCitrate |