Loading
PDBj
MenuPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDBDonate
RCSB PDBPDBeBMRBAdv. SearchSearch help

6MFY

Crystal structure of a 5-domain construct of LgrA in the substrate donation state

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsCLSI BEAMLINE 08ID-1
Synchrotron siteCLSI
Beamline08ID-1
Temperature [K]100
Detector technologyPIXEL
Collection date2017-08-10
DetectorDECTRIS PILATUS3 S 6M
Wavelength(s)0.979
Spacegroup nameP 21 21 21
Unit cell lengths89.863, 141.114, 171.532
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution85.766 - 2.500
R-factor0.2395
Rwork0.238
R-free0.26640
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)6mfw
RMSD bond length0.010
RMSD bond angle1.128
Data reduction softwareDIALS
Data scaling softwareAimless
Phasing softwarePHASER
Refinement softwarePHENIX ((1.13_2998: ???))
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]147.5302.550
High resolution limit [Å]2.5002.500
Rmerge0.095
Number of reflections809424330
<I/σ(I)>17.42
Completeness [%]99.7
Redundancy12.3
CC(1/2)0.475
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP7.22770.2 M sodium/potassium phosphate, 22% PEG3350, 0.1 M Bis-Tris propane, pH 7.2

248335

PDB entries from 2026-01-28

PDB statisticsPDBj update infoContact PDBjnumon