6MF5
Crystal structure of budding yeast Cdc5 polo-box domain in complex with Spc72 phosphopeptide.
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 17-ID |
Synchrotron site | APS |
Beamline | 17-ID |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2016-12-13 |
Detector | DECTRIS PILATUS3 S 6M |
Wavelength(s) | 0.9795 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 51.470, 68.190, 86.230 |
Unit cell angles | 90.00, 102.59, 90.00 |
Refinement procedure
Resolution | 42.080 - 2.700 |
R-factor | 0.234 |
Rwork | 0.231 |
R-free | 0.26100 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 1q4o |
RMSD bond length | 0.003 |
RMSD bond angle | 0.800 |
Data reduction software | MOSFLM |
Data scaling software | HKL-3000 |
Phasing software | PHASER |
Refinement software | PHENIX (1.9_1692) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 42.100 | 2.780 |
High resolution limit [Å] | 2.700 | 2.700 |
Number of reflections | 16158 | 1184 |
<I/σ(I)> | 9.1 | |
Completeness [%] | 99.9 | |
Redundancy | 5.8 | |
CC(1/2) | 0.990 | 0.317 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 277 | 100 mM Bis-Tris pH 6.50, 200 mM magnesium chloride, 100 mM cesium chloride, 25 % PEG 3350. |