6MEP
Crystal structure of the catalytic domain of the proto-oncogene tyrosine-protein kinase MER in complex with inhibitor UNC3437
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 22-ID |
Synchrotron site | APS |
Beamline | 22-ID |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2013-10-19 |
Detector | MARMOSAIC 300 mm CCD |
Wavelength(s) | 1.0743 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 51.366, 92.048, 69.690 |
Unit cell angles | 90.00, 101.67, 90.00 |
Refinement procedure
Resolution | 37.069 - 2.893 |
R-factor | 0.2099 |
Rwork | 0.205 |
R-free | 0.26820 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.002 |
RMSD bond angle | 0.643 |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | PHASER |
Refinement software | PHENIX (1.10.1_2155) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 50.000 | 2.920 |
High resolution limit [Å] | 2.893 | 2.893 |
Rmerge | 0.142 | 0.771 |
Number of reflections | 14260 | 337 |
<I/σ(I)> | 5.7 | |
Completeness [%] | 99.9 | 98.5 |
Redundancy | 4.2 | 3.7 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 8.5 | 285.2 | Protein at 32.5 mg/mL (in 20 mM Tris pH 8.0, 500 mM NaCl, 2mM BME) was incubated overnight with inhibitor at 2.5 mM final concentration, and then was mixed 1:1 with crystallization solution (27-33% (v/v) Peg 400, 200 mM MgCl2, 100 mM Tris pH 8.5). |