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6MC6

Crystal structure of PprA filament from Deinococcus radiodurans

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsAPS BEAMLINE 17-ID
Synchrotron siteAPS
Beamline17-ID
Temperature [K]100
Detector technologyPIXEL
Collection date2018-07-28
DetectorDECTRIS PILATUS 6M
Wavelength(s)0.97928
Spacegroup nameP 2 21 21
Unit cell lengths56.780, 90.950, 121.110
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution51.410 - 2.747
R-factor0.2136
Rwork0.211
R-free0.26000
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)6bdu
RMSD bond length0.005
RMSD bond angle0.657
Data reduction softwareMOSFLM (7.2.2)
Data scaling softwareAimless (0.7.1)
Phasing softwarePHASER (1.13-2998)
Refinement softwarePHENIX (1.13_2998)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]90.9502.880
High resolution limit [Å]2.7472.750
Rmerge0.190
Rmeas0.217
Rpim0.103
Number of reflections169922181
<I/σ(I)>7.31.9
Completeness [%]99.798.9
Redundancy7.88
CC(1/2)0.9940.355
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP8293.15Protein at 4.5 mg/mL in 150 mM KCl, 20 mM Tris, pH 7.5 was mixed in 1:1 volume ratio with Wizard Classic 1 (Rigaku) #46 - a solution of 200 mM Lithium sulfate, 10% (w/v) PEG 8000 and 100 mM Imidazole/ HCl at pH 8.0. The drop was suspended over a 1.5M Ammonium sulfate dehydrating solution and incubated for about 5 weeks.

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