6MBF
GphF Dehydratase 1
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 23-ID-B |
Synchrotron site | APS |
Beamline | 23-ID-B |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2016-10-09 |
Detector | DECTRIS EIGER X 16M |
Wavelength(s) | 1.033 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 41.900, 74.418, 86.836 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 43.418 - 1.543 |
R-factor | 0.1854 |
Rwork | 0.183 |
R-free | 0.22190 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 6mbg |
Data reduction software | XDS |
Data scaling software | Aimless (0.6.2) |
Phasing software | PHASER |
Refinement software | PHENIX |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 43.420 | 43.420 | 1.570 |
High resolution limit [Å] | 1.540 | 8.450 | 1.540 |
Rmerge | 0.046 | 0.030 | 0.513 |
Rmeas | 0.050 | 0.033 | 0.650 |
Rpim | 0.020 | 0.014 | 0.391 |
Total number of observations | 209788 | 1676 | 2642 |
Number of reflections | 37735 | 306 | 1156 |
<I/σ(I)> | 22.9 | 67.9 | 1.7 |
Completeness [%] | 92.6 | 99.2 | 59.3 |
Redundancy | 5.6 | 5.5 | 2.3 |
CC(1/2) | 0.999 | 0.999 | 0.553 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 7.3 | 293.15 | 0.1 M trisodium citrate, 20% PEG 4000, 22% 1,4-butanediol, 100 mM Hepes pH 7.3 |