6M9M
Streptococcus mutans AlkD2 bound to inosine-5'-monophosphate
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 21-ID-G |
Synchrotron site | APS |
Beamline | 21-ID-G |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2014-06-14 |
Detector | RAYONIX MX300-HS |
Wavelength(s) | 0.97856 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 60.152, 63.041, 65.546 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 28.407 - 1.401 |
R-factor | 0.1375 |
Rwork | 0.136 |
R-free | 0.17290 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 4x8q |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | PHASER |
Refinement software | PHENIX |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 50.000 | 50.000 | 1.450 |
High resolution limit [Å] | 1.400 | 3.020 | 1.400 |
Rmerge | 0.049 | 0.030 | 0.333 |
Rmeas | 0.051 | 0.032 | 0.347 |
Rpim | 0.014 | 0.009 | 0.096 |
Total number of observations | 691091 | ||
Number of reflections | 49016 | 5091 | 4823 |
<I/σ(I)> | 14 | ||
Completeness [%] | 98.5 | 97 | 98.8 |
Redundancy | 14.1 | 13.2 | 12.8 |
CC(1/2) | 0.999 | 0.973 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 4.7 | 294 | 18% (w/v) PEG 3350, 200 mM sodium phosphate, pH 4.7 |