Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

6M9B

Wild-type streptavidin in complex with biotin solved by native SAD with data collected at 6 keV

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsSLS BEAMLINE X06DA
Synchrotron siteSLS
BeamlineX06DA
Temperature [K]100
Detector technologyPIXEL
Collection date2015-09-11
DetectorDECTRIS PILATUS 2M
Wavelength(s)1, 2.075
Spacegroup nameP 1 21 1
Unit cell lengths50.978, 98.322, 52.795
Unit cell angles90.00, 112.64, 90.00
Refinement procedure
Resolution49.160 - 1.548
R-factor0.1551
Rwork0.154
R-free0.18340
Structure solution methodSAD
RMSD bond length0.009
RMSD bond angle1.368
Data reduction softwareXDS
Data scaling softwareXSCALE
Phasing softwareSHARP
Refinement softwarePHENIX (1.9_1692)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]49.1601.604
High resolution limit [Å]1.5481.548
Number of reflections69231
<I/σ(I)>22.3
Completeness [%]99.3
Redundancy6.7
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP5.529813.25mg SAV WT + 0.610mg biotin in 500uL H2O in the well: 500uL => 50% MPD sitting drops: 1uL SAV-biot + 1uL 80% MPD, 100mM MMT pH 5.5

218500

PDB entries from 2024-04-17

PDB statisticsPDBj update infoContact PDBjnumon