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6M8F

Engineered sperm whale myoglobin-based carbene transferase

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsCHESS BEAMLINE F1
Synchrotron siteCHESS
BeamlineF1
Temperature [K]100
Detector technologyPIXEL
Collection date2017-06-21
DetectorDECTRIS PILATUS 6M
Wavelength(s)0.9768
Spacegroup nameP 6
Unit cell lengths90.780, 90.780, 45.580
Unit cell angles90.00, 90.00, 120.00
Refinement procedure
Resolution32.163 - 1.100
R-factor0.1273
Rwork0.126
R-free0.14580
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)1jw8
RMSD bond length0.008
RMSD bond angle1.134
Data reduction softwareMOSFLM
Data scaling softwareSCALA
Phasing softwarePHENIX
Refinement softwarePHENIX ((1.10_2155: ???))
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]39.4301.160
High resolution limit [Å]1.1001.100
Rmerge0.0510.448
Rpim0.0250.407
Number of reflections760575028
<I/σ(I)>13.5
Completeness [%]87.740.4
Redundancy4.31.4
CC(1/2)0.9990.617
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP296A crystal was grown by mixing 1 ul of reservoir buffer (2 M ammonium sulfate, 0.2 M Tris pH 8.6) with 1 ul of protein in buffer (20 mM Tris pH 8.0, 1 mM EDTA). The crystal was cryoprotected by soaking it in a drop containing reservoir buffer supplemented with 25% sucrose for 5 minutes prior to being flash-cooled in liquid nitrogen

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PDB entries from 2024-07-17

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