6M8F
Engineered sperm whale myoglobin-based carbene transferase
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | CHESS BEAMLINE F1 |
Synchrotron site | CHESS |
Beamline | F1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2017-06-21 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 0.9768 |
Spacegroup name | P 6 |
Unit cell lengths | 90.780, 90.780, 45.580 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 32.163 - 1.100 |
R-factor | 0.1273 |
Rwork | 0.126 |
R-free | 0.14580 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 1jw8 |
RMSD bond length | 0.008 |
RMSD bond angle | 1.134 |
Data reduction software | MOSFLM |
Data scaling software | SCALA |
Phasing software | PHENIX |
Refinement software | PHENIX ((1.10_2155: ???)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 39.430 | 1.160 |
High resolution limit [Å] | 1.100 | 1.100 |
Rmerge | 0.051 | 0.448 |
Rpim | 0.025 | 0.407 |
Number of reflections | 76057 | 5028 |
<I/σ(I)> | 13.5 | |
Completeness [%] | 87.7 | 40.4 |
Redundancy | 4.3 | 1.4 |
CC(1/2) | 0.999 | 0.617 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 296 | A crystal was grown by mixing 1 ul of reservoir buffer (2 M ammonium sulfate, 0.2 M Tris pH 8.6) with 1 ul of protein in buffer (20 mM Tris pH 8.0, 1 mM EDTA). The crystal was cryoprotected by soaking it in a drop containing reservoir buffer supplemented with 25% sucrose for 5 minutes prior to being flash-cooled in liquid nitrogen |