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6M24

Uncommon structural features of rabbit MHC class I (RLA-A1) complexed with rabbit haemorrhagic disease virus (RHDV) derived peptide, VP60-2

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsSSRF BEAMLINE BL19U1
Synchrotron siteSSRF
BeamlineBL19U1
Temperature [K]100
Detector technologyCMOS
Collection date2019-07-10
DetectorSDMS
Wavelength(s)1.03853
Spacegroup nameP 21 21 21
Unit cell lengths49.578, 76.218, 155.081
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution32.390 - 2.290
R-factor0.1968
Rwork0.194
R-free0.24630
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)5deg
RMSD bond length0.008
RMSD bond angle0.893
Data reduction softwareHKL-2000
Data scaling softwareHKL-2000
Phasing softwareCNS
Refinement softwarePHENIX (1.13_2998)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]50.0002.380
High resolution limit [Å]2.2002.300
Rmerge0.1010.857
Number of reflections2701427014
<I/σ(I)>2.75
Completeness [%]99.9
Redundancy12.2
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP52910.2M magnesium chloride hexahydrate, 0.1M sodium citrate tribasic, pH 5.0, 10% w/v polyethylene glycol 20000

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