6LZH
Crystal structure of Alpha/beta hydrolase GrgF from Penicillium sp. sh18
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | PHOTON FACTORY BEAMLINE BL-1A |
Synchrotron site | Photon Factory |
Beamline | BL-1A |
Temperature [K] | 80 |
Detector technology | PIXEL |
Collection date | 2019-10-31 |
Detector | DECTRIS EIGER X 16M |
Wavelength(s) | 1.0800 |
Spacegroup name | P 1 |
Unit cell lengths | 42.683, 55.010, 67.272 |
Unit cell angles | 101.71, 100.51, 114.28 |
Refinement procedure
Resolution | 47.670 - 1.900 |
R-factor | 0.1801 |
Rwork | 0.178 |
R-free | 0.22590 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 2hdw |
RMSD bond length | 0.007 |
RMSD bond angle | 0.903 |
Data reduction software | XDS |
Data scaling software | XDS |
Phasing software | PHASER |
Refinement software | PHENIX (1.16_3549) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 47.670 | 2.020 |
High resolution limit [Å] | 1.900 | 1.900 |
Rmeas | 0.086 | 0.483 |
Number of reflections | 39582 | 6083 |
<I/σ(I)> | 11.5 | 2.79 |
Completeness [%] | 96.3 | 91.5 |
Redundancy | 3.626 | 3.404 |
CC(1/2) | 0.997 | 0.882 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 293 | PEG 3350, Calcium acetate hydrate |