6LYH
Crystal structure of tea N9-methyltransferase CkTcS in complex with SAH and 1,3,7-trimethyluric acid
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRF BEAMLINE BL17U1 |
Synchrotron site | SSRF |
Beamline | BL17U1 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2019-01-01 |
Detector | ADSC QUANTUM 315r |
Wavelength(s) | 1.0000 |
Spacegroup name | P 1 |
Unit cell lengths | 87.744, 86.812, 123.258 |
Unit cell angles | 90.21, 90.04, 90.17 |
Refinement procedure
Resolution | 43.872 - 3.150 |
R-factor | 0.263952027126 |
Rwork | 0.263 |
R-free | 0.29805 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 2efj |
RMSD bond length | 0.004 |
RMSD bond angle | 0.830 |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | PHENIX |
Refinement software | PHENIX (1.9_1692+SVN) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 50.000 | 3.200 |
High resolution limit [Å] | 3.140 | 3.150 |
Rmerge | 1.110 | |
Number of reflections | 62167 | 55414 |
<I/σ(I)> | 9.7 | |
Completeness [%] | 96.4 | |
Redundancy | 2.5 | |
CC(1/2) | 0.995 | 0.845 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 7.5 | 277 | 0.1 M HEPES (pH 7.5), 1 M Sodium Citrate |