6LXN
Crystal structure of C-terminal DNA-binding domain of Escherichia coli OmpR in complex with F1-DNA
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | NSRRC BEAMLINE TPS 05A |
Synchrotron site | NSRRC |
Beamline | TPS 05A |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2018-03-18 |
Detector | RAYONIX MX300-HS |
Wavelength(s) | 0.975 |
Spacegroup name | P 63 |
Unit cell lengths | 70.753, 70.753, 165.344 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 28.730 - 2.930 |
R-factor | 0.178 |
Rwork | 0.170 |
R-free | 0.24150 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 6lxl |
RMSD bond length | 0.009 |
RMSD bond angle | 1.127 |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | PHASER |
Refinement software | PHENIX (1.13_2998) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 28.730 | 3.040 |
High resolution limit [Å] | 2.930 | 2.930 |
Number of reflections | 8766 | 985 |
<I/σ(I)> | 45.5 | |
Completeness [%] | 99.5 | |
Redundancy | 9.4 | |
CC(1/2) | 0.998 | 0.996 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 288 | 0.1 M Magnesium acetate tetrahydrate, 0.05 M MED monohydrate, pH 5.6, 20% v/v (+/-)-2-Methyl-2,4,pentanediol |