6LWY
Crystal structure of Laterosporulin3, bacteriocin produced by Brevibacillus sp. strain SKR3
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | ROTATING ANODE |
Source details | RIGAKU MICROMAX-007 HF |
Temperature [K] | 100 |
Detector technology | IMAGE PLATE |
Collection date | 2014-11-09 |
Detector | MAR scanner 345 mm plate |
Wavelength(s) | 1.5418 |
Spacegroup name | P 43 3 2 |
Unit cell lengths | 63.460, 63.460, 63.460 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 36.639 - 2.300 |
R-factor | 0.1915 |
Rwork | 0.187 |
R-free | 0.23310 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 4ozk |
Data reduction software | MOSFLM |
Data scaling software | SCALA (3.3.21) |
Phasing software | PHASER |
Refinement software | PHENIX (1.9) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 36.640 | 36.640 | 2.420 |
High resolution limit [Å] | 2.300 | 7.270 | 2.300 |
Rmerge | 0.131 | 0.035 | 0.618 |
Rmeas | 0.140 | 0.078 | 0.039 |
Rpim | 0.037 | 0.021 | 0.012 |
Total number of observations | 995 | 4492 | |
Number of reflections | 2214 | 97 | 309 |
<I/σ(I)> | 16.6 | 31.9 | 4.5 |
Completeness [%] | 100.0 | 98.9 | 100 |
Redundancy | 14 | 10.3 | 14.5 |
CC(1/2) | 0.999 | 1.000 | 0.852 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 5 | 293 | 0.2 M potassium bromide, 0.2 M potassium thiocyanate, 0.1 M sodium acetate, 3% w/v PGA-LM (Polyglycolic acid, 200-400 kDa) and 3% w/v PEG (Polyethylene glycol, 20 kDa), pH 5 |