6LTU
Crystal structure of Cas12i2 ternary complex with double Mg2+ bound in catalytic pocket
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRF BEAMLINE BL17U1 |
Synchrotron site | SSRF |
Beamline | BL17U1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2019-10-12 |
Detector | DECTRIS EIGER X 16M |
Wavelength(s) | 0.97918 |
Spacegroup name | C 2 2 21 |
Unit cell lengths | 94.329, 123.575, 281.218 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 46.870 - 2.570 |
R-factor | 0.2033 |
Rwork | 0.202 |
R-free | 0.22880 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 6ltr |
RMSD bond length | 0.007 |
RMSD bond angle | 1.062 |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | PHASER |
Refinement software | PHENIX (1.18.2_3874) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 50.000 | 2.610 |
High resolution limit [Å] | 2.570 | 2.570 |
Rmerge | 0.160 | 0.985 |
Rmeas | 0.174 | 1.063 |
Rpim | 0.066 | 0.395 |
Number of reflections | 52840 | 2646 |
<I/σ(I)> | 12.7 | 2.2 |
Completeness [%] | 100.0 | 99.3 |
Redundancy | 6.8 | 7.2 |
CC(1/2) | 0.989 | 0.715 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | EVAPORATION | 7.2 | 289 | 0.2 M NaCl, 0.1 M Tris pH 7.2, 18% PEG 6000 |