6LTP
Crystal structure of Cas12i2 binary complex
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRF BEAMLINE BL19U1 |
Synchrotron site | SSRF |
Beamline | BL19U1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2019-11-27 |
Detector | DECTRIS PILATUS3 S 6M |
Wavelength(s) | 0.97892 |
Spacegroup name | P 43 |
Unit cell lengths | 146.309, 146.309, 144.602 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 48.710 - 3.400 |
R-factor | 0.2086 |
Rwork | 0.207 |
R-free | 0.23020 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 6ltr |
RMSD bond length | 0.006 |
RMSD bond angle | 1.153 |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | PHASER |
Refinement software | PHENIX (1.18.2_3874) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 50.000 | 3.460 |
High resolution limit [Å] | 3.400 | 3.400 |
Rmerge | 0.132 | 0.684 |
Rmeas | 0.143 | 0.759 |
Rpim | 0.055 | 0.323 |
Number of reflections | 41862 | 2069 |
<I/σ(I)> | 13.3 | 2.4 |
Completeness [%] | 100.0 | 100 |
Redundancy | 6.6 | 5.4 |
CC(1/2) | 0.989 | 0.534 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | EVAPORATION | 289 | 0.027 M HEPES pH 7.5, 4 % PEG20K, 0.146 M Na citrate, 0.073 M Tris pH 8.2, 13.87% PEG 3350 |