6LTG
Crystal structure of the Fab fragment of murine monoclonal antibody OHV-3 against Human herpesvirus 6B
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SPRING-8 BEAMLINE BL26B1 |
Synchrotron site | SPring-8 |
Beamline | BL26B1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2019-02-05 |
Detector | DECTRIS EIGER R 4M |
Wavelength(s) | 1.0 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 81.380, 95.200, 113.780 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 38.645 - 1.630 |
R-factor | 0.1824 |
Rwork | 0.182 |
R-free | 0.20360 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 4wcy |
Data reduction software | XDS |
Data scaling software | XDS |
Phasing software | AutoSol |
Refinement software | PHENIX (1.14_3260) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 38.645 | 38.645 | 1.670 |
High resolution limit [Å] | 1.630 | 7.290 | 1.630 |
Rmerge | 0.059 | 0.022 | 0.710 |
Rmeas | 0.070 | 0.027 | 0.835 |
Total number of observations | 756090 | ||
Number of reflections | 212352 | 2329 | 15724 |
<I/σ(I)> | 13.4 | 39.45 | 1.85 |
Completeness [%] | 99.6 | 98.1 | 99.8 |
Redundancy | 3.561 | 3.275 | 3.646 |
CC(1/2) | 0.999 | 0.999 | 0.655 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 6.5 | 293 | 100 mM BIS-Tris pH 6.5, 0.2 M MgCl2, polyethylene glycol 3350 23% (w/v) |