6LRZ
Crystal structure of Keap1 in complex with dimethyl fumarate (DMF)
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | ROTATING ANODE |
Source details | RIGAKU |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2019-11-07 |
Detector | RIGAKU HyPix-6000HE |
Wavelength(s) | 1.540 |
Spacegroup name | P 61 |
Unit cell lengths | 104.079, 104.079, 56.666 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 21.780 - 1.540 |
R-factor | 0.2097 |
Rwork | 0.208 |
R-free | 0.23830 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 2dyh |
Data reduction software | Aimless |
Data scaling software | Aimless |
Phasing software | PHENIX |
Refinement software | PHENIX (1.18_3855) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 23.650 | 23.650 | 1.530 |
High resolution limit [Å] | 1.500 | 8.220 | 1.500 |
Rmerge | 0.075 | 0.041 | 1.557 |
Rmeas | 0.079 | 0.043 | 1.724 |
Rpim | 0.025 | 0.013 | 0.731 |
Total number of observations | 456974 | 3890 | 14936 |
Number of reflections | 55972 | 354 | 2748 |
<I/σ(I)> | 12.6 | 42.8 | 0.8 |
Completeness [%] | 99.8 | 95.2 | 100 |
Redundancy | 8.2 | 11 | 5.4 |
CC(1/2) | 0.999 | 0.999 | 0.683 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 5 | 293 | PEG 8000, Lithium Sulphate, Glycerol, Sodium Acetate |