6LN0
Crystal structure of three main domains of nonstructural protein 3 from Coronavirus
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRF BEAMLINE BL17U |
Synchrotron site | SSRF |
Beamline | BL17U |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2018-11-01 |
Detector | ADSC QUANTUM 315 |
Wavelength(s) | 0.978 |
Spacegroup name | C 1 2 1 |
Unit cell lengths | 139.922, 71.348, 64.433 |
Unit cell angles | 90.00, 92.26, 90.00 |
Refinement procedure
Resolution | 39.018 - 2.455 |
R-factor | 0.2125 |
Rwork | 0.208 |
R-free | 0.22800 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 3ewo |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | PHENIX |
Refinement software | PHENIX (1.14_3260) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 50.000 | 50.000 | 2.540 |
High resolution limit [Å] | 2.450 | 5.280 | 2.450 |
Rmerge | 0.140 | 0.081 | 0.985 |
Rmeas | 0.145 | 0.083 | |
Rpim | 0.035 | 0.020 | 0.274 |
Total number of observations | 372635 | ||
Number of reflections | 22938 | 2345 | 2268 |
<I/σ(I)> | 8 | ||
Completeness [%] | 98.8 | 98 | 99.2 |
Redundancy | 16.2 | 12.5 | |
CC(1/2) | 0.995 | 0.948 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 293 | PEG 20000, imidazole, Bis-tris |