6LEL
Structure of E. coli beta-glucuronidase complex with C6-hexyl uronic isofagomine
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | NSRRC BEAMLINE TPS 05A |
Synchrotron site | NSRRC |
Beamline | TPS 05A |
Temperature [K] | 110 |
Detector technology | CCD |
Collection date | 2017-10-24 |
Detector | RAYONIX MX300-HS |
Wavelength(s) | 1 |
Spacegroup name | C 1 2 1 |
Unit cell lengths | 165.781, 76.720, 124.888 |
Unit cell angles | 90.00, 124.64, 90.00 |
Refinement procedure
Resolution | 29.495 - 2.498 |
R-factor | 0.2404 |
Rwork | 0.238 |
R-free | 0.28630 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 3k46 |
RMSD bond length | 0.013 |
RMSD bond angle | 1.636 |
Data scaling software | HKL-2000 |
Phasing software | PHENIX |
Refinement software | PHENIX (1.11.1_2575) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 30.000 | 30.000 | 2.590 |
High resolution limit [Å] | 2.498 | 5.380 | 2.500 |
Rmerge | 0.095 | 0.033 | 0.638 |
Rmeas | 0.111 | 0.039 | 0.763 |
Rpim | 0.057 | 0.020 | 0.412 |
Number of reflections | 43895 | 4593 | 4024 |
<I/σ(I)> | 8 | ||
Completeness [%] | 97.9 | 99.9 | 90.3 |
Redundancy | 3.6 | 3.7 | 2.8 |
CC(1/2) | 0.998 | 0.719 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 298 | 0.2 M MgCl2, 0.1 M Tris-HCl, pH 8.5 and 21% PEG4K |