6LE4
Crystal structure of cystathionine gamma-lyase from Lactobacillus plantarum complexed with cystathionine
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SPRING-8 BEAMLINE BL38B1 |
Synchrotron site | SPring-8 |
Beamline | BL38B1 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2014-05-30 |
Detector | ADSC QUANTUM 315 |
Wavelength(s) | 1.0 |
Spacegroup name | C 1 2 1 |
Unit cell lengths | 216.568, 200.738, 114.883 |
Unit cell angles | 90.00, 117.21, 90.00 |
Refinement procedure
Resolution | 36.257 - 3.100 |
R-factor | 0.2471 |
Rwork | 0.246 |
R-free | 0.27250 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | pdbid 4L0O |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | MOLREP |
Refinement software | PHENIX (1.14_3260) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 100.000 | 100.000 | 3.210 |
High resolution limit [Å] | 3.083 | 6.680 | 3.100 |
Rmerge | 0.142 | 0.061 | 0.434 |
Rmeas | 0.189 | 0.081 | 0.575 |
Rpim | 0.123 | 0.052 | 0.374 |
Number of reflections | 72733 | 6935 | 7469 |
<I/σ(I)> | 4.1 | ||
Completeness [%] | 91.4 | 86.1 | 94.2 |
Redundancy | 2 | 2.2 | 2 |
CC(1/2) | 0.990 | 0.761 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 4 | 298 | KH2PO4, NaH2PO4 |