6LE1
Structure of RRM2 domain of DND1 protein
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ESRF BEAMLINE ID23-1 |
Synchrotron site | ESRF |
Beamline | ID23-1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2018-09-05 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 0.972 |
Spacegroup name | I 41 |
Unit cell lengths | 44.615, 44.615, 111.332 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 31.570 - 2.300 |
R-factor | 0.2116 |
Rwork | 0.210 |
R-free | 0.24310 |
Structure solution method | SAD |
Data reduction software | XDS |
Data scaling software | Aimless |
Phasing software | AutoSol |
Refinement software | REFMAC (5.8.0257) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 31.600 | 2.340 |
High resolution limit [Å] | 2.300 | 2.300 |
Rmerge | 0.092 | 0.530 |
Rmeas | 0.100 | |
Rpim | 0.039 | |
Number of reflections | 4233 | 237 |
<I/σ(I)> | 15.7 | |
Completeness [%] | 92.4 | 99.6 |
Redundancy | 6.7 | 6.7 |
CC(1/2) | 0.997 | 0.921 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 8 | 293 | 0.1M MES Monohydrate pH- 6.5, 30% PEG MME 5000, 0.2M Ammonium sulphate |