6LBJ
Structure of mouse GLD-2 (Terminal nucleotidyltransferase 2, TENT2)
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRF BEAMLINE BL17U1 |
Synchrotron site | SSRF |
Beamline | BL17U1 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2015-07-09 |
Detector | RAYONIX MX-225 |
Wavelength(s) | 0.918003 |
Spacegroup name | P 1 |
Unit cell lengths | 42.277, 47.144, 105.446 |
Unit cell angles | 87.38, 88.06, 63.81 |
Refinement procedure
Resolution | 35.514 - 2.704 |
R-factor | 0.253956762327 |
Rwork | 0.253 |
R-free | 0.27084 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 5jnb |
RMSD bond length | 0.008 |
RMSD bond angle | 1.162 |
Data reduction software | XDS |
Data scaling software | XDS |
Phasing software | MrBUMP |
Refinement software | PHENIX (1.12_2829) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 42.280 | 2.800 |
High resolution limit [Å] | 2.700 | 2.700 |
Rmerge | 0.091 | |
Number of reflections | 17614 | 1695 |
<I/σ(I)> | 11.2 | |
Completeness [%] | 88.3 | 83.5 |
Redundancy | 2.6 | |
CC(1/2) | 0.977 | 0.835 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 7.4 | 291.15 | 23.6% PEG 3350, 80mM HEPEs pH 7.4 |