6LAY
Domain-swapped dimer structure of a Single-chain Monellin loop1-delta4-QVVAG mutant
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | ROTATING ANODE |
Source details | RIGAKU FR-X |
Temperature [K] | 80 |
Detector technology | IMAGE PLATE |
Collection date | 2019-04-08 |
Detector | RIGAKU RAXIS IV++ |
Wavelength(s) | 1.5478 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 30.170, 73.790, 45.990 |
Unit cell angles | 90.00, 100.02, 90.00 |
Refinement procedure
Resolution | 45.289 - 3.001 |
R-factor | 0.2099 |
Rwork | 0.207 |
R-free | 0.26270 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 2o9u |
Data reduction software | MOSFLM |
Data scaling software | Aimless (0.7.4) |
Phasing software | MOLREP |
Refinement software | PHENIX (1.15.2_3472) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 45.290 | 45.290 | 3.180 |
High resolution limit [Å] | 3.000 | 9.000 | 3.000 |
Rmerge | 0.098 | 0.046 | 0.253 |
Rmeas | 0.109 | 0.051 | 0.282 |
Rpim | 0.047 | 0.023 | 0.122 |
Total number of observations | 21231 | 799 | 3383 |
Number of reflections | 4033 | 163 | 641 |
<I/σ(I)> | 12.5 | 21.4 | 5.9 |
Completeness [%] | 100.0 | 99.3 | 100 |
Redundancy | 5.3 | 4.9 | 5.3 |
CC(1/2) | 0.996 | 0.998 | 0.943 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 8.5 | 293 | 20% PEG 3350, 0.2mM sodium acetate ,Tris HCl pH 8.5 |