6L6D
X-ray structure of human galectin-10 in complex with D-N-acetylgalactosamine
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | ROTATING ANODE |
Source details | RIGAKU |
Temperature [K] | 100 |
Detector technology | IMAGE PLATE |
Collection date | 2019-08-28 |
Detector | RIGAKU |
Wavelength(s) | 1.5418 |
Spacegroup name | P 65 2 2 |
Unit cell lengths | 48.900, 48.900, 261.660 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 19.628 - 1.930 |
Rwork | 0.202 |
R-free | 0.23320 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 1qkq |
RMSD bond length | 0.006 |
RMSD bond angle | 1.363 |
Data reduction software | XDS |
Data scaling software | XDS |
Phasing software | MOLREP |
Refinement software | REFMAC (5.8.0253) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 19.630 | 1.980 |
High resolution limit [Å] | 1.930 | 1.930 |
Number of reflections | 14992 | 1048 |
<I/σ(I)> | 16.8 | |
Completeness [%] | 99.8 | |
Redundancy | 19.3 | |
CC(1/2) | 0.998 | 0.903 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 293 | 1.6 M ammonium sulfate, 0.1 M MES monohydrate pH 6.5, 10 % (v/v) 1,4-dioxane |