6L5A
The structure of the UdgX mutant H109E at a pre-excision state
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | ROTATING ANODE |
Source details | RIGAKU MICROMAX-007 HF |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2019-06-11 |
Detector | OXFORD ONYX CCD |
Wavelength(s) | 1.54 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 47.698, 48.316, 86.222 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 21.555 - 1.800 |
R-factor | 0.153380596451 |
Rwork | 0.151 |
R-free | 0.19267 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 6io9 |
RMSD bond length | 0.012 |
RMSD bond angle | 1.668 |
Data reduction software | CrysalisPro |
Data scaling software | CrysalisPro |
Phasing software | PHASER |
Refinement software | PHENIX (1.10.1_2155) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 21.560 | 1.900 |
High resolution limit [Å] | 1.800 | 1.800 |
Rmerge | 0.064 | 0.128 |
Number of reflections | 18687 | 2586 |
<I/σ(I)> | 15.9 | 8.4 |
Completeness [%] | 98.1 | 95.1 |
Redundancy | 4.8 | 4.2 |
CC(1/2) | 0.998 | 0.985 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 5.5 | 298 | 19% PEG3350, 0.1 M sodium citrate, 0.2 M NaCl |