6L4H
Crystal structure of human NDRG3 C30S mutant
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | PAL/PLS BEAMLINE 7A (6B, 6C1) |
| Synchrotron site | PAL/PLS |
| Beamline | 7A (6B, 6C1) |
| Temperature [K] | 100 |
| Detector technology | CCD |
| Collection date | 2018-12-04 |
| Detector | ADSC QUANTUM 270 |
| Wavelength(s) | 0.97934 |
| Spacegroup name | P 31 2 1 |
| Unit cell lengths | 99.759, 99.759, 332.710 |
| Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
| Resolution | 47.824 - 3.400 |
| Rwork | 0.241 |
| R-free | 0.27740 |
| Structure solution method | MOLECULAR REPLACEMENT |
| Starting model (for MR) | 6l4b |
| RMSD bond length | 0.003 |
| RMSD bond angle | 1.246 |
| Data reduction software | HKL-2000 |
| Data scaling software | HKL-2000 |
| Phasing software | PHENIX |
| Refinement software | REFMAC (5.8.0258) |
Data quality characteristics
| Overall | Inner shell | Outer shell | |
| Low resolution limit [Å] | 50.000 | 50.000 | 3.460 |
| High resolution limit [Å] | 3.400 | 9.210 | 3.400 |
| Rmerge | 0.103 | 0.043 | 0.732 |
| Rmeas | 0.111 | 0.045 | 0.787 |
| Rpim | 0.039 | 0.015 | 0.275 |
| Total number of observations | 177018 | ||
| Number of reflections | 26798 | 1519 | 1311 |
| <I/σ(I)> | 6.4 | ||
| Completeness [%] | 97.7 | 98.4 | 97.5 |
| Redundancy | 6.6 | 8.1 | 6.7 |
| CC(1/2) | 0.998 | 0.826 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, HANGING DROP | 295 | 200 mM sodium citrate tribasic dehydrate, 20% PEG 3350 |






