6KYS
The structure of the M. tb toxin MazF-mt1
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | ROTATING ANODE |
Source details | RIGAKU MICROMAX-007 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2019-05-07 |
Detector | OXFORD ONYX CCD |
Wavelength(s) | 1.54 |
Spacegroup name | P 21 21 2 |
Unit cell lengths | 52.140, 72.485, 60.975 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 22.460 - 2.200 |
R-factor | 0.212967304022 |
Rwork | 0.211 |
R-free | 0.25863 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 5hjz |
RMSD bond length | 0.005 |
RMSD bond angle | 0.773 |
Data reduction software | CrysalisPro |
Data scaling software | SCALA |
Phasing software | MOLREP |
Refinement software | PHENIX (1.10.1_2155) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 22.460 | 2.320 |
High resolution limit [Å] | 2.200 | 2.200 |
Rmerge | 0.250 | 0.630 |
Number of reflections | 12032 | 1728 |
<I/σ(I)> | 5.8 | 2.2 |
Completeness [%] | 98.7 | 99.3 |
Redundancy | 4.8 | |
CC(1/2) | 0.966 | 0.669 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 5 | 293 | 20% PEG 3350, 0.1 M NaOAc pH 5.0, and 0.1 M NaCl |