6KVH
The mutant crystal structure of endo-polygalacturonase (T284A) from Talaromyces leycettanus JCM 12802
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRF BEAMLINE BL17U |
Synchrotron site | SSRF |
Beamline | BL17U |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2019-05-20 |
Detector | DECTRIS PILATUS3 6M |
Wavelength(s) | 1.0 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 44.361, 68.562, 88.276 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 25.930 - 1.200 |
R-factor | 0.1253 |
Rwork | 0.124 |
R-free | 0.14970 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 6kve |
RMSD bond length | 0.004 |
RMSD bond angle | 0.795 |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | PHASER |
Refinement software | PHENIX (1.14_3260) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 25.930 | 1.241 |
High resolution limit [Å] | 1.198 | 1.198 |
Rmerge | 0.010 | 0.010 |
Rmeas | 0.011 | 0.010 |
Rpim | 0.010 | 0.010 |
Number of reflections | 80946 | 6194 |
<I/σ(I)> | 15.72 | 3.94 |
Completeness [%] | 95.0 | 73.61 |
Redundancy | 1.3 | 1 |
CC(1/2) | 1.000 | 1.000 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 3.5 | 293 | 0.1 M citric acid (pH 3.5), 25% (w/v) polyethylene glycol 3350 |