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6KVE

Crystal structure of a GH28 endo-polygalacturonase from Talaromyces leycettanus JCM 12802

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsSSRF BEAMLINE BL17U
Synchrotron siteSSRF
BeamlineBL17U
Temperature [K]100
Detector technologyPIXEL
Collection date2019-05-20
DetectorDECTRIS PILATUS3 6M
Wavelength(s)1.0
Spacegroup nameP 21 21 21
Unit cell lengths44.175, 67.823, 87.991
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution53.720 - 1.320
R-factor0.1626
Rwork0.160
R-free0.21970
Structure solution methodFOURIER SYNTHESIS
RMSD bond length0.005
RMSD bond angle0.775
Data reduction softwareHKL-2000
Data scaling softwareHKL-2000
Phasing softwarePHASER
Refinement softwarePHENIX (1.14_3260)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]53.7201.370
High resolution limit [Å]1.3201.320
Rmerge0.0880.750
Rmeas0.1030.888
Rpim0.0520.462
Number of reflections605895346
<I/σ(I)>6.631.09
Completeness [%]95.884.93
Redundancy3.73.1
CC(1/2)0.9930.528
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP4.82930.1 M citrate buffer (pH 4.8), 28% (w/v) polyethylene glycol monomethyl ether 5000

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