6KVE
Crystal structure of a GH28 endo-polygalacturonase from Talaromyces leycettanus JCM 12802
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | SSRF BEAMLINE BL17U |
| Synchrotron site | SSRF |
| Beamline | BL17U |
| Temperature [K] | 100 |
| Detector technology | PIXEL |
| Collection date | 2019-05-20 |
| Detector | DECTRIS PILATUS3 6M |
| Wavelength(s) | 1.0 |
| Spacegroup name | P 21 21 21 |
| Unit cell lengths | 44.175, 67.823, 87.991 |
| Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
| Resolution | 53.720 - 1.320 |
| R-factor | 0.1626 |
| Rwork | 0.160 |
| R-free | 0.21970 |
| Structure solution method | FOURIER SYNTHESIS |
| RMSD bond length | 0.005 |
| RMSD bond angle | 0.775 |
| Data reduction software | HKL-2000 |
| Data scaling software | HKL-2000 |
| Phasing software | PHASER |
| Refinement software | PHENIX (1.14_3260) |
Data quality characteristics
| Overall | Outer shell | |
| Low resolution limit [Å] | 53.720 | 1.370 |
| High resolution limit [Å] | 1.320 | 1.320 |
| Rmerge | 0.088 | 0.750 |
| Rmeas | 0.103 | 0.888 |
| Rpim | 0.052 | 0.462 |
| Number of reflections | 60589 | 5346 |
| <I/σ(I)> | 6.63 | 1.09 |
| Completeness [%] | 95.8 | 84.93 |
| Redundancy | 3.7 | 3.1 |
| CC(1/2) | 0.993 | 0.528 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, HANGING DROP | 4.8 | 293 | 0.1 M citrate buffer (pH 4.8), 28% (w/v) polyethylene glycol monomethyl ether 5000 |






