6KV1
Structure of wild type closed form of peptidoglycan peptidase ZN SAD
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | PAL/PLS BEAMLINE 7A (6B, 6C1) |
| Synchrotron site | PAL/PLS |
| Beamline | 7A (6B, 6C1) |
| Temperature [K] | 100 |
| Detector technology | CCD |
| Collection date | 2016-06-12 |
| Detector | ADSC QUANTUM 315r |
| Wavelength(s) | 1.0 |
| Spacegroup name | P 32 2 1 |
| Unit cell lengths | 58.087, 58.087, 152.516 |
| Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
| Resolution | 30.387 - 1.722 |
| R-factor | 0.2189 |
| Rwork | 0.217 |
| R-free | 0.25990 |
| Structure solution method | MOLECULAR REPLACEMENT |
| Data reduction software | HKL-2000 |
| Data scaling software | HKL-2000 |
| Phasing software | MOLREP |
| Refinement software | PHENIX (1.13_2998) |
Data quality characteristics
| Overall | Inner shell | Outer shell | |
| Low resolution limit [Å] | 50.000 | 50.000 | 1.750 |
| High resolution limit [Å] | 1.720 | 4.670 | 1.720 |
| Rmerge | 0.120 | 0.087 | 0.681 |
| Rmeas | 0.121 | 0.088 | 0.691 |
| Rpim | 0.020 | 0.015 | 0.113 |
| Total number of observations | 1141822 | ||
| Number of reflections | 32441 | 1781 | 1597 |
| <I/σ(I)> | 14.6 | ||
| Completeness [%] | 99.9 | 98.4 | 100 |
| Redundancy | 35.2 | 34.8 | 35.3 |
| CC(1/2) | 0.997 | 0.951 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, SITTING DROP | 295 | 10% 2-propanol, 100 mM citrate at pH 5.5, and 20 % PEG4000 |






