Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

6KQE

Thermus thermophilus initial transcription complex comprising sigma A and 5'-OH RNA of 4 nt

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsCHESS BEAMLINE F1
Synchrotron siteCHESS
BeamlineF1
Temperature [K]100
Detector technologyCCD
Collection date2012-07-30
DetectorADSC QUANTUM 270
Wavelength(s)1.075
Spacegroup nameC 1 2 1
Unit cell lengths184.567, 103.757, 295.981
Unit cell angles90.00, 98.70, 90.00
Refinement procedure
Resolution48.947 - 3.300
R-factor0.2195
Rwork0.217
R-free0.25820
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)4g7h
RMSD bond length0.008
RMSD bond angle1.074
Data reduction softwareHKL-2000
Data scaling softwareHKL-2000
Phasing softwarePHENIX
Refinement softwarePHENIX (1.12_2829)
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]50.00050.0003.360
High resolution limit [Å]3.3008.9403.300
Rmerge0.1320.0360.955
Total number of observations282967
Number of reflections8367343554146
<I/σ(I)>5
Completeness [%]100.010099.7
Redundancy3.43.33.3
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP2950.05 M Magnesium chloride, 0.2 M Potassium chloride, 0.1 M Tris-HCl pH8, 10% PEG 4000

222926

PDB entries from 2024-07-24

PDB statisticsPDBj update infoContact PDBjnumon