Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

6KOP

Mycobacterium tuberculosis initial transcription complex comprising sigma H and 5'-OH RNA of 9 nt

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsSSRF BEAMLINE BL17U1
Synchrotron siteSSRF
BeamlineBL17U1
Temperature [K]100
Detector technologyPIXEL
Collection date2018-04-29
DetectorDECTRIS EIGER2 X 16M
Wavelength(s)0.97916
Spacegroup nameP 1 21 1
Unit cell lengths127.371, 162.637, 133.421
Unit cell angles90.00, 117.95, 90.00
Refinement procedure
Resolution49.252 - 3.303
R-factor0.2185
Rwork0.217
R-free0.25470
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)5zx3
Data reduction softwareHKL-2000
Data scaling softwareHKL-2000
Phasing softwarePHENIX
Refinement softwarePHENIX (1.14_3260)
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]50.00050.0003.360
High resolution limit [Å]3.3008.9403.300
Rmerge0.1190.0421.547
Rmeas0.1340.0481.748
Rpim0.0610.0230.797
Total number of observations299315
Number of reflections7088235533583
<I/σ(I)>8.6
Completeness [%]98.696.799.2
Redundancy4.23.94.2
CC(1/2)0.9970.502
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP2950.008 M magnesium acetate, 0.05 M sodium cacodylate pH6.5, 14% PEG 400

223166

PDB entries from 2024-07-31

PDB statisticsPDBj update infoContact PDBjnumon