6KMK
Crystal structure of hydrogen peroxide bound bovine lactoperoxidase at 2.3 A resolution
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | RRCAT INDUS-2 BEAMLINE PX-BL21 |
Synchrotron site | RRCAT INDUS-2 |
Beamline | PX-BL21 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2019-07-11 |
Detector | MARRESEARCH |
Wavelength(s) | 0.9795 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 53.828, 80.420, 75.823 |
Unit cell angles | 90.00, 102.58, 90.00 |
Refinement procedure
Resolution | 54.460 - 2.300 |
Rwork | 0.245 |
R-free | 0.29510 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 4NT3 |
RMSD bond length | 0.007 |
RMSD bond angle | 1.510 |
Data reduction software | AUTOMAR |
Data scaling software | Aimless |
Phasing software | MOLREP |
Refinement software | REFMAC (5.8.0253) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 54.515 | 2.380 |
High resolution limit [Å] | 2.300 | 2.300 |
Rmerge | 0.112 | 0.495 |
Number of reflections | 27946 | 2737 |
<I/σ(I)> | 7.2 | 2 |
Completeness [%] | 99.2 | |
Redundancy | 3.4 | 3.3 |
CC(1/2) | 0.960 | 1.000 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 6.8 | 298 | 0.2M AMMONIUM IODIDE, 20% PEG3350, pH 6.8, VAPOR DIFFUSION, HANGING DROP, 298K. |