6KK8
XN joint refinement of manganese catalase from Thermus Thermophilus HB27
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | PHOTON FACTORY BEAMLINE BL-17A |
| Synchrotron site | Photon Factory |
| Beamline | BL-17A |
| Temperature [K] | 293 |
| Detector technology | PIXEL |
| Collection date | 2017-03-20 |
| Detector | DECTRIS PILATUS 6M |
| Wavelength(s) | 0.98 |
| Spacegroup name | P 21 3 |
| Unit cell lengths | 133.396, 133.396, 133.396 |
| Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
| Resolution | 14.384 - 2.349 |
| R-factor | 0.1536 |
| Rwork | 0.152 |
| R-free | 0.19100 |
| Structure solution method | MOLECULAR REPLACEMENT |
| Starting model (for MR) | 2v8u |
| RMSD bond length | 0.007 |
| RMSD bond angle | 1.261 |
| Refinement software | PHENIX ((1.13_2998)) |
Data quality characteristics
| Overall | Inner shell | Outer shell | |
| Low resolution limit [Å] | 44.500 | 2.430 | 1.390 |
| High resolution limit [Å] | 1.370 | 2.350 | 1.370 |
| Rmerge | 0.092 | 0.742 | 0.956 |
| Rpim | 0.030 | 0.381 | 0.365 |
| Number of reflections | 164892 | 14524 | 8188 |
| <I/σ(I)> | 25.7 | 1.4 | 1.8 |
| Completeness [%] | 100.0 | 97 | 100 |
| Redundancy | 9.8 | 4.4 | 8.4 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, SITTING DROP | 8.2 | 293 | 1.95 M Ammonium Sulfate d-8, 14.5v/v% ethylenglycol, 50 mM AMPSO buffer pD 9.6. Drop: 32 mg/mL of manganese catalase was mixed with equal volume of Reservoir. |
| 1 | VAPOR DIFFUSION, SITTING DROP | 8.2 | 293 | 1.95 M Ammonium Sulfate d-8, 14.5v/v% ethylenglycol, 50 mM AMPSO buffer pD 9.6. Drop: 32 mg/mL of manganese catalase was mixed with equal volume of Reservoir. |






