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6KG0

NifS from Helicobacter pylori, soaked with L-cysteine for 118 sec

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsPHOTON FACTORY BEAMLINE BL-17A
Synchrotron sitePhoton Factory
BeamlineBL-17A
Temperature [K]100
Detector technologyPIXEL
Collection date2019-06-29
DetectorDECTRIS EIGER X 16M
Wavelength(s)0.98
Spacegroup nameP 41 21 2
Unit cell lengths103.200, 103.200, 134.100
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution46.200 - 2.780
R-factor0.1854
Rwork0.184
R-free0.22140
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)5wt2
RMSD bond length0.013
RMSD bond angle2.186
Data reduction softwareXDS
Data scaling softwareXSCALE
Phasing softwareMOLREP
Refinement softwareREFMAC (5.8.0253)
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]46.20046.2002.800
High resolution limit [Å]2.70010.0002.700
Rmerge0.0830.0460.783
Rmeas0.0900.0490.842
Total number of observations265780
Number of reflections188357343868
<I/σ(I)>14.1834.172.28
Completeness [%]100.099.2100
Redundancy7.0866.777.329
CC(1/2)0.9980.9970.861
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP7.529317% (w/v) PEF 4000, 8.5% (v/v) 2-propanol, 15%(v/v) glycerol, 85mM HEPES-NaOH

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