6KFL
Crystal structure of a two-quartet DNA G-quadruplex complexed with the porphyrin TMPyP4
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRF BEAMLINE BL19U1 |
Synchrotron site | SSRF |
Beamline | BL19U1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2019-04-07 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 1.03923 |
Spacegroup name | C 1 2 1 |
Unit cell lengths | 48.152, 47.192, 38.133 |
Unit cell angles | 90.00, 113.15, 90.00 |
Refinement procedure
Resolution | 35.063 - 1.920 |
R-factor | 0.2207 |
Rwork | 0.218 |
R-free | 0.26170 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 6jjf |
Data reduction software | HKL-3000 |
Data scaling software | HKL-3000 |
Phasing software | PHASER |
Refinement software | PHENIX (1.13_2998) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 50.000 | 1.989 |
High resolution limit [Å] | 1.920 | 1.920 |
Rmerge | 0.046 | 0.354 |
Number of reflections | 5961 | 487 |
<I/σ(I)> | 23.81 | |
Completeness [%] | 96.2 | |
Redundancy | 6.1 | 4.9 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 6.5 | 283 | KCaco,Nacaco,KCl,NaCl,hexammine cobalt(III) chloride,MPD |