6KCJ
Crystal structure of H5N2 hemagglutinin Apo-Q226L mutant from A/chicken/Taiwan/0502/2012
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | NSRRC BEAMLINE BL15A1 |
Synchrotron site | NSRRC |
Beamline | BL15A1 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2017-10-15 |
Detector | ADSC QUANTUM 315 |
Wavelength(s) | 1 |
Spacegroup name | H 3 2 |
Unit cell lengths | 110.439, 110.439, 314.139 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 28.152 - 2.460 |
R-factor | 0.206 |
Rwork | 0.203 |
R-free | 0.25930 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 5ykc |
RMSD bond length | 0.008 |
RMSD bond angle | 1.049 |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | PHASER |
Refinement software | PHENIX ((1.11.1_2575: ???)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 30.000 | 2.550 |
High resolution limit [Å] | 2.460 | 2.460 |
Rmerge | 0.134 | 1.415 |
Rmeas | 0.140 | 1.483 |
Rpim | 0.042 | 0.441 |
Number of reflections | 27258 | 2682 |
<I/σ(I)> | 21.4 | 2 |
Completeness [%] | 100.0 | 100 |
Redundancy | 11.1 | |
CC(1/2) | 0.990 | 0.830 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 293.15 | 0.1M Tris, 0.2M MgCl, 16%PEG8000 |