6K7C
Dimeric Shewanella violacea cytochrome c5
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SPRING-8 BEAMLINE BL26B1 |
Synchrotron site | SPring-8 |
Beamline | BL26B1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2019-02-01 |
Detector | DECTRIS EIGER X 4M |
Wavelength(s) | 1.0000 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 34.772, 52.542, 80.070 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 31.910 - 1.150 |
R-factor | 0.13924 |
Rwork | 0.138 |
R-free | 0.15703 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 5b6q |
RMSD bond length | 0.012 |
RMSD bond angle | 2.451 |
Data reduction software | XDS |
Data scaling software | SCALA |
Phasing software | MOLREP |
Refinement software | REFMAC (5.8.0238) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 43.930 | 1.170 |
High resolution limit [Å] | 1.150 | 1.150 |
Rmerge | 0.031 | 0.323 |
Number of reflections | 51052 | 2160 |
<I/σ(I)> | 26.1 | 4.2 |
Completeness [%] | 96.7 | 83.5 |
Redundancy | 6.5 | 4.6 |
CC(1/2) | 0.999 | 0.882 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 277 | 20% PEG 3350 and 200 mM potassium nitrate |