6K04
Crystal structure of BRD2(BD2)with ligand BY27 bound
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | SSRF BEAMLINE BL19U1 |
| Synchrotron site | SSRF |
| Beamline | BL19U1 |
| Temperature [K] | 100 |
| Detector technology | PIXEL |
| Collection date | 2019-03-22 |
| Detector | DECTRIS PILATUS 6M |
| Wavelength(s) | 0.97852 |
| Spacegroup name | P 2 21 21 |
| Unit cell lengths | 31.835, 52.424, 71.288 |
| Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
| Resolution | 42.234 - 1.251 |
| R-factor | 0.169 |
| Rwork | 0.168 |
| R-free | 0.19170 |
| Structure solution method | MOLECULAR REPLACEMENT |
| Starting model (for MR) | 2dvv |
| RMSD bond length | 0.006 |
| RMSD bond angle | 1.019 |
| Data reduction software | HKL-3000 |
| Data scaling software | Aimless |
| Phasing software | PHASER |
| Refinement software | PHENIX (1.10.1_2155) |
Data quality characteristics
| Overall | Outer shell | |
| Low resolution limit [Å] | 42.234 | 1.296 |
| High resolution limit [Å] | 1.251 | 1.251 |
| Rmerge | 0.070 | 0.327 |
| Rmeas | 0.073 | 0.340 |
| Rpim | 0.021 | 0.094 |
| Number of reflections | 33653 | 3239 |
| <I/σ(I)> | 34.96 | 55.29 |
| Completeness [%] | 99.8 | |
| Redundancy | 6.6 | 12.6 |
| CC(1/2) | 0.992 | 0.971 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, SITTING DROP | 289 | 0.2M ammonium sulfate, 25% PEG 4000 |






