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6JZ1

Apo structure of b-glucuronidase from Ruminococcus gnavus at 1.7 Angstrom resolution

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsNSRRC BEAMLINE BL13C1
Synchrotron siteNSRRC
BeamlineBL13C1
Temperature [K]277
Detector technologyCCD
Collection date2018-10-16
DetectorADSC QUANTUM 210
Wavelength(s)1
Spacegroup nameC 1 2 1
Unit cell lengths163.008, 103.128, 112.617
Unit cell angles90.00, 130.96, 90.00
Refinement procedure
Resolution29.710 - 1.730
R-factor0.308
Rwork0.116
R-free0.19200
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)5z19
Data reduction softwareHKL-2000
Data scaling softwareHKL-2000
Phasing softwarePHENIX
Refinement softwarePHENIX (19-1692)
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]30.00010.0001.790
High resolution limit [Å]1.7303.7301.730
Rmerge0.0620.0340.564
Rmeas0.0720.0390.657
Rpim0.0360.0200.332
Total number of observations566535
Number of reflections1446981433914423
<I/σ(I)>9.9
Completeness [%]99.29799.5
Redundancy3.943.7
CC(1/2)0.9970.759
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP29870% MPD, 0.1 M HEPES, pH 7.5, 0.2 M CaCl2

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