6JQW
Crystal structure of a hydrogenase from Trichosporon moniliiforme
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | NSRRC BEAMLINE BL15A1 |
Synchrotron site | NSRRC |
Beamline | BL15A1 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2018-10-20 |
Detector | RAYONIX MX-300 |
Wavelength(s) | 1.0 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 57.691, 93.763, 128.811 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 24.842 - 1.437 |
R-factor | 0.1526 |
Rwork | 0.152 |
R-free | 0.17750 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 2dvt |
RMSD bond length | 0.008 |
RMSD bond angle | 1.052 |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | PHASER |
Refinement software | PHENIX ((1.13_2998: ???)) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 25.000 | 25.000 | 1.490 |
High resolution limit [Å] | 1.437 | 3.100 | 1.440 |
Rmerge | 0.083 | 0.050 | 0.573 |
Rmeas | 0.089 | 0.053 | 0.621 |
Rpim | 0.032 | 0.019 | 0.235 |
Number of reflections | 127185 | 13279 | 12563 |
<I/σ(I)> | 7 | ||
Completeness [%] | 100.0 | 99.9 | 99.8 |
Redundancy | 7.5 | 7.9 | 6.4 |
CC(1/2) | 0.998 | 0.883 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 8.5 | 295 | PEG400, NaCl |