6JQV
Crystal structure of Arabidopsis thaliana NRP2
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ESRF BEAMLINE MASSIF-3 |
Synchrotron site | ESRF |
Beamline | MASSIF-3 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2018-03-09 |
Detector | DECTRIS EIGER X 4M |
Wavelength(s) | 0.9794 |
Spacegroup name | H 3 2 |
Unit cell lengths | 123.450, 123.450, 228.710 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 42.040 - 3.420 |
R-factor | 0.2746 |
Rwork | 0.272 |
R-free | 0.32020 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 5day |
RMSD bond length | 0.003 |
RMSD bond angle | 0.615 |
Data reduction software | XDS |
Data scaling software | XDS |
Phasing software | MOLREP |
Refinement software | PHENIX ((1.12_2829)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 42.040 | 3.544 |
High resolution limit [Å] | 3.420 | 3.422 |
Rmerge | 0.128 | |
Rmeas | 0.134 | |
Rpim | 0.040 | 0.370 |
Number of reflections | 9304 | 914 |
<I/σ(I)> | 17.37 | 2.31 |
Completeness [%] | 99.7 | 100 |
Redundancy | 11.4 | 12 |
CC(1/2) | 0.999 | 0.722 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 291 | 0.2M potassium fluoride, 2.2M Ammonium sulfate |