6JPT
Crystal structure of human PAC3 homodimer (trigonal form)
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SPRING-8 BEAMLINE BL44XU |
Synchrotron site | SPring-8 |
Beamline | BL44XU |
Temperature [K] | 95 |
Detector technology | PIXEL |
Collection date | 2018-10-05 |
Detector | DECTRIS EIGER X 16M |
Wavelength(s) | 0.90000 |
Spacegroup name | P 31 2 1 |
Unit cell lengths | 71.229, 71.229, 47.074 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 14.655 - 0.960 |
R-factor | 0.1362 |
Rwork | 0.136 |
R-free | 0.14580 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 2z5e |
RMSD bond length | 0.008 |
RMSD bond angle | 1.051 |
Data reduction software | XDS |
Data scaling software | Aimless |
Phasing software | MOLREP |
Refinement software | PHENIX ((1.11.1_2575: ???)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 47.070 | 0.980 |
High resolution limit [Å] | 0.960 | 0.960 |
Rmerge | 0.052 | 1.162 |
Rmeas | 0.056 | 1.303 |
Rpim | 0.021 | 0.579 |
Number of reflections | 83927 | 4048 |
<I/σ(I)> | 17.1 | 1.3 |
Completeness [%] | 99.9 | 98 |
Redundancy | 6.4 | 4.8 |
CC(1/2) | 0.998 | 0.606 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 7.5 | 293 | 30% PEG2000 monomethyl ether, 0.1 M potassium thiocyanate |