6JMD
Crystal structure of human DHODH in complex with inhibitor 1223
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRF BEAMLINE BL19U1 |
Synchrotron site | SSRF |
Beamline | BL19U1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2018-08-01 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 0.979 |
Spacegroup name | P 32 2 1 |
Unit cell lengths | 90.627, 90.627, 123.169 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 48.450 - 1.781 |
R-factor | 0.1552 |
Rwork | 0.155 |
R-free | 0.17680 |
RMSD bond length | 0.008 |
RMSD bond angle | 1.098 |
Data reduction software | HKL-3000 |
Data scaling software | HKL-3000 |
Phasing software | PHASER |
Refinement software | PHENIX (1.8.4_1496) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 50.000 | 1.820 |
High resolution limit [Å] | 1.780 | 1.780 |
Rmeas | 0.159 | |
Rpim | 0.050 | |
Number of reflections | 56535 | |
<I/σ(I)> | 14.36 | |
Completeness [%] | 99.9 | |
Redundancy | 10 | |
CC(1/2) | 0.970 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 293 | hepes pH4.6, 2M AMMONIUM SULPHATE, 30% Glycerol |