6JKH
The NAD+-bound form of human NSDHL
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SPRING-8 BEAMLINE BL44XU |
Synchrotron site | SPring-8 |
Beamline | BL44XU |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2016-04-20 |
Detector | MARMOSAIC 300 mm CCD |
Wavelength(s) | 0.9 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 50.027, 77.366, 53.993 |
Unit cell angles | 90.00, 96.80, 90.00 |
Refinement procedure
Resolution | 27.410 - 3.000 |
R-factor | 0.17632 |
Rwork | 0.173 |
R-free | 0.23841 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 3wj7 |
RMSD bond length | 0.008 |
RMSD bond angle | 1.490 |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | MOLREP |
Refinement software | REFMAC (5.8.0238) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 30.000 | 3.050 |
High resolution limit [Å] | 3.000 | 3.000 |
Rmerge | 0.146 | 0.865 |
Number of reflections | 8240 | 410 |
<I/σ(I)> | 22.2 | |
Completeness [%] | 99.8 | |
Redundancy | 3.98 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 293 | 0.2 M calcium chloride, 44% PEG400, 0.1 M Tris, and pH 8.0 |