6JK7
Crystal structure of SpaE basal pilin from Lactobacillus rhamnosus GG - Trigonal form
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ESRF BEAMLINE BM14 |
Synchrotron site | ESRF |
Beamline | BM14 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2015-09-25 |
Detector | MARMOSAIC 225 mm CCD |
Wavelength(s) | 0.97887 |
Spacegroup name | P 32 2 1 |
Unit cell lengths | 130.045, 130.045, 59.335 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 52.495 - 3.204 |
R-factor | 0.2135 |
Rwork | 0.212 |
R-free | 0.23770 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 6jbv |
RMSD bond length | 0.004 |
RMSD bond angle | 1.008 |
Data reduction software | XDS |
Data scaling software | Aimless |
Phasing software | PHASER |
Refinement software | PHENIX ((1.14_3260: ???)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 65.023 | 3.260 |
High resolution limit [Å] | 3.204 | 3.204 |
Rmerge | 0.064 | 0.715 |
Rmeas | 0.071 | 0.785 |
Rpim | 0.029 | 0.321 |
Number of reflections | 9728 | 495 |
<I/σ(I)> | 19.3 | 2.5 |
Completeness [%] | 99.9 | 100 |
Redundancy | 5.6 | 5.8 |
CC(1/2) | 0.999 | 0.760 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 8.5 | 295 | 0.1 M bis-tris propane pH 8.5, 0.3 M sodium formate, 22% (w/v) PEG 3350 |